PathVisio
Biological pathway creation and curation software
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⚠️ Transition update:
As announced, the Classic WikiPathways site is now read-only and the old web service has been turned off.
From 1 May 2026, the Classic site will be fully retired and we will complete our transition to the new GitHub-based system.
If you are still using the old web service, please contact us immediately so we can help you transition.
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Curators: PathVisio upload is currently not working.
If you need to upload or update a pathway, please reach out and we will help you find a solution. This should be resolved in the next few weeks.
Tutorials
Tutorials will be made available to help you navigate PathVisio and its possibilties. More tutorials will be added in the near future.
Introduction to pathway modeling
Are you completely new in the field of pathways modeling? Then this introduction course is a great place for you to start!
Getting started with PathVisio
If you want to get familiar with PathVisio and how the tools works, follow this started guide.
Basic tutorials
- Pathway drawing (WikiPathways academy)
- Data visualization
- Pathway statistics (coming soon)
Advanced tutorials
- Multi-omics data visualization
- Time-series data visualization (coming soon)
Hands-on tutorials with examples
- Lung cancer pathway analysis (data import, data visualization, data statistics with questions in between)