zhengpuas47 (Pu Zheng) · GitHub
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Achievement: StarstruckAchievement: Arctic Code Vault ContributorAchievement: Pull Shark

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Achievement: StarstruckAchievement: Arctic Code Vault ContributorAchievement: Pull Shark

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@ZhuangLab @mcb111

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  1. MERlin MERlin Public

    Forked from emanuega/MERlin

    MERlin is an extensible analysis pipeline applied to decoding MERFISH data

    Python 4 5

  2. MERFISH_probe_design MERFISH_probe_design Public

    Forked from xingjiepan/MERFISH_probe_design

    A python3 pipeline for MERFISH probe design.

    Jupyter Notebook 2 4

  3. ZhuangLab/Chromatin_Analysis_2020_cell ZhuangLab/Chromatin_Analysis_2020_cell Public

    Source codes and example scripts for chromatin tracing projects in Zhuang lab

    Jupyter Notebook 29 8

  4. ZhuangLab/Chromatin_Analysis_MOp ZhuangLab/Chromatin_Analysis_MOp Public

    Analysis codes and scripts for chromatin of MOp

    Jupyter Notebook 3 2

  5. jweissmanlab/fishtank jweissmanlab/fishtank Public

    A collection of tools for processing MERFISH data

    Jupyter Notebook 2 3

  6. jweissmanlab/PEtracer-2025 jweissmanlab/PEtracer-2025 Public

    Code for Koblan, Yost, Zheng, Colgan, et al. Science (2025)

    Jupyter Notebook 4