wwood (Ben J Woodcroft) · GitHub
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367 followers · 50 following

Achievements

Achievement: Pair Extraordinairex3Achievement: YOLOAchievement: QuickdrawAchievement: Galaxy BrainAchievement: Starstruckx2Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Achievements

Achievement: Pair Extraordinairex3Achievement: YOLOAchievement: QuickdrawAchievement: Galaxy BrainAchievement: Starstruckx2Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Highlights

  • Pro

Organizations

@bioconda @centre-for-microbiome-research @emerge-bii

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  1. CoverM CoverM Public

    Read alignment statistics for metagenomics

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  2. kingfisher-download kingfisher-download Public

    Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.

    Python 316 45

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    Novelty-inclusive microbial (and now dsDNA phage) community profiling of shotgun metagenomes

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    Strain resolver for metagenomics

    Rust 82 9

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    A hybrid assembly and MAG recovery pipeline (and more!)

    Python 119 16

  6. AroneyS/binchicken AroneyS/binchicken Public

    Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly

    HTML 79 7