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1. bzhanglab/deep_learning_in_proteomics bzhanglab/deep_learning_in_proteomics Public

   A list of tools on proteomics using deep learning

   108 27

2. bzhanglab/PepQuery bzhanglab/PepQuery Public

   PepQuery: a targeted peptide search engine

   Java 15 2

3. PDV PDV Public

   PDV: an integrative proteomics data viewer

   Java 65 22

4. bzhanglab/DeepMVP bzhanglab/DeepMVP Public

   Python 28 3

5. Noble-Lab/FDRBench Noble-Lab/FDRBench Public

   Estimation of false discovery proportion for mass spectrometry proteomics data using entrapment

   Java 32 3

6. Noble-Lab/Carafe Noble-Lab/Carafe Public

   High quality in silico spectral library generation for data-independent acquisition proteomics

   Java 22 5