MuJoCo fruit fly body model and locomotion RL tasks

A curated list of fruit fly connectome projects: MaleCNS, FlyWire, brain simulations, embodied models, games, and research tools.

Neurokernel Project

A fruit fly connectome as a drone pilot. Camera -> fly eyes -> spiking brain -> descending neurons -> drone. Live 3D demo in your browser.

Experimental Drosophila-inspired camera-to-robot bridge. Working mock neural backend, optical flow, IMU feedback and UDP motor control. MaleCNS integration planned.

Real fly anatomy and model-output starter. Custom license requires web UI and repository attribution.

Embodied Drosophila: 138,639-neuron whole-brain connectome simulation (FlyWire v783) in a biomechanical body (NeuroMechFly v2 / MuJoCo). Vision, olfaction, gustation, flight, and emergent behaviors — all from the real connectome.

Emergent behaviour and neural dynamics in artificial agents tracking odour plumes

Transforms for navis that enable mapping between different Drosophila template brains.

A fruit fly connectome (165k neurons, 25.6M synapses) trained to drive a simulated street from pixels. Code, patches, renderer, results.

Resource-aware open research on neural circuits, bodies, and simulated organisms. Starting with Drosophila.

🪰 Chat with 138,000 neurons — whole-brain fruit fly simulation with natural language interface and dopamine learning

Connectome-inspired asset allocation with interactive neural-state visualization

Runs the complete released Drosophila male CNS connectome (165,122 neurons, 25.5M edges) inside a physical fly body, in closed loop, on one GPU.

把果蝇全脑连接组跑在一台 16GB 笔记本上：接身体、做成浏览器游戏（Running the whole Drosophila brain connectome on a 16 GB laptop, wiring it to a body, shipping it as a browser game ）

The home of the Drosophila anatomy ontology

A video game boss driven by the biological connectome of Drosophila melanogaster (~165k neurons, MaleCNS v1.0). Deterministic Rust engine, vectorized Python VecEnv (>1M steps/s), Three.js 3D web visualizer.

Your lab's animals, stocks and supplies in one app: mouse colony, zebrafish, flies, worms, plasmids, inventories, calendar and lab notebook. Free and open source.

Compile biological connectomes into trainable PyTorch networks. Real neurons. Real connectivity. torch.nn.Module.

FreeClimber is a background-subtracting particle detection platform designed to quantify group climbing performance in a Drosophila negative geotaxis (climbing) assay