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An Insight Data Engineering Project using Spark, Kafka, ElasticSearch, Redis, Flask, AngularJS
Python 3 1
microbial diversity analysis package based on IGS for whole-genome shotgun metagenomic data
Python 2
Classifying virus DNA sequences using large scale machine learning with Apache Spark
Jupyter Notebook 3
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
Python 790 297
Paper code: "These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure"
Jupyter Notebook 10 14
Vica: Software to identify highly divergent DNA and RNA viruses and phages in microbiomes
Python 5 5
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