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1. chromolooper chromolooper Public

   Chromatin loops can connect genetic elements together, this package attempt to do the same at the data-level and builds on tools such as pybedtools.

   Python 1

2. dchallenge dchallenge Public

   As the Ay Lab we are competing in the DChallenge where we are looking SNPs colocalizing for T1D and expression and integrating this with HiChIP interactions.

   Jupyter Notebook 1

3. Muunraker/nipalsMCIA Muunraker/nipalsMCIA Public

   HTML 7 2

4. mini-tutorials mini-tutorials Public

   Improving my linux practice through mini-tutorials

5. cmi-pb-challenge-winter-23-24 cmi-pb-challenge-winter-23-24 Public template

   Jupyter Notebook 1

6. VCU-Bioinformatics-Core/bioinformatics-epicenter-pipelines VCU-Bioinformatics-Core/bioinformatics-epicenter-pipelines Public

   Pipeline to process data directly for the VCU bioinformatics website

   Python