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Pyranges: a Python framework for ultrafast sequence interval operations
Python 56 9
Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library
Python 33 5
Performant Pythonic GenomicRanges
Python 494 50
NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.
C 223 24
Ultraperformant reimplementation of SICER
Cython 60 10
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