cmatKhan (Chase Mateusiak) · GitHub
Skip to content
View cmatKhan's full-sized avatar
22 followers · 35 following

Achievements

Achievement: Pair Extraordinairex3Achievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex3Achievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Highlights

  • Pro

Organizations

@BrentLab @collaborativebioinformatics

Block or report cmatKhan

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
cmatKhan/README.md

Pinned Loading

  1. nf-core/callingcards nf-core/callingcards Public

    A pipeline for processing calling cards data

    Nextflow 5 3

  2. callingCardsTools callingCardsTools Public archive

    A collection of objects and functions to work with calling cards sequencing tools. See docs at https://cmatkhan.github.io/callingCardsTools

    Python

  3. BSA BSA Public

    A collection of functions intended to facilitate bulk segregant analysis of cryptococcus neoformans strains associated with capsule formation

    R 1

  4. labretriever labretriever Public

    This package defines an extended datacard format based on the Huggingface datacard specification that allows for the precise documentation of experimental data with complex heterogenous designs. It…

    Python 2

  5. BrentLab/Dual_Threshold_Optimization BrentLab/Dual_Threshold_Optimization Public

    Dual Threshold Optimization compares two ranked lists of features (e.g. genes) to determine the rank threshold for each list that minimizes the hypergeometric p-value of the overlap of features. It…

    Rust 4 2

  6. BrentLab/tfbpshiny BrentLab/tfbpshiny Public

    A shiny app to explore a collection of yeast binding and perturbation data collected by the brent lab

    Python 2