Hi there, I'm a Bioinformatics Analyst | Computational Biologist 👋

🧬 Algorithm Development | Spatial & Single-cell Genomics | Python & R | Open to Work (F1 OPT)

I am a Master's candidate in Biomedical Sciences (Biomedical Informatics track) at The Ohio State University, focusing on developing computational methods and analyzation for high-dimensional genomic data.

• 🔭 I’m currently working on: Developing computational methods to decode intercellular signaling patterns from spatial transcriptomics through ligand-receptor interaction modeling, and conducting large-scale single-cell RNA-seq analyses.

• 👯 I’m looking to collaborate on: Open-source bioinformatics tool development and large-scale omics data analysis projects.

• 🌱 I’m open to many areas: Digital pathology applications and emerging spatial omics technologies.

• 📫 How to reach me: chen.13589@osu.edu

---

🛠️ Technical Skills

Domain	Tools & Technologies
Programming	Python, R, Bash/Shell, C++
Data Science / Machine Learning	pandas, NumPy, scikit-learn, PyTorch
Bioinformatics Tools	Cell Ranger, Seurat, Scanpy, Squidpy, STAR, HISAT2, kallisto, DESeq2, edgeR, limma
Omics Data Analysis	Single-cell RNA-seq, Spatial Transcriptomics (10x Visium, Xenium), Bulk RNA-seq, Proteomics (Mass spectrometry, RPPA)
Platforms	Linux, GitHub, HPC Clusters, VS Code, Shiny
Data Visualization	ggplot2, matplotlib