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Smyth Lab

Bioinformatics Division, Walter and Eliza Hall Institute of Medical Research (WEHI)

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  1. limpa limpa Public

    Documentation for the limpa Bioconductor package, which implements quantification and differential analysis of mass-spectrometry proteomics data, with probabilistic recovery of information from mis…

    24 2

  2. diffHic diffHic Public

    Clone of the Bioconductor repository for the diffHic package.

    R 5 3

  3. diffHicUsersGuide diffHicUsersGuide Public

    Source code and comments for the diffHic user's guide.

    TeX 1

  4. edgeR edgeR Public

    Documentation for the edgeR package, which implements differential analyses of sequence count data. Implements a range of statistical methodology based on the negative binomial distribution, empiri…

    1

  5. scRNAseq-Workshop scRNAseq-Workshop Public

  6. protDP protDP Public

    Forked from Mengbo-Li/protDP

    Modelling the relationship between missingness and intensity in label-free shotgun proteomics data

    R

Repositories

Showing 7 of 7 repositories
  • diffHicUsersGuide Public

    Source code and comments for the diffHic user's guide.

    SmythLab/diffHicUsersGuide's past year of commit activity
    TeX 1 0 0 0 Updated Oct 12, 2026
  • diffHic Public

    Clone of the Bioconductor repository for the diffHic package.

    SmythLab/diffHic's past year of commit activity
    R 5 3 4 0 Updated Sep 23, 2026
  • limpa Public

    Documentation for the limpa Bioconductor package, which implements quantification and differential analysis of mass-spectrometry proteomics data, with probabilistic recovery of information from missing values using the detection probability curve.

    SmythLab/limpa's past year of commit activity
    24 2 1 0 Updated Sep 7, 2026
  • limma Public

    Documentation for the limma package

    SmythLab/limma's past year of commit activity
    0 0 0 0 Updated Apr 30, 2026
  • edgeR Public

    Documentation for the edgeR package, which implements differential analyses of sequence count data. Implements a range of statistical methodology based on the negative binomial distribution, empirical Bayes, generalized linear models and quasi-likelihood.

    SmythLab/edgeR's past year of commit activity
    1 0 0 0 Updated Apr 6, 2026
  • protDP Public Forked from Mengbo-Li/protDP

    Modelling the relationship between missingness and intensity in label-free shotgun proteomics data

    SmythLab/protDP's past year of commit activity
    R 0 Apache-2.0 1 0 0 Updated Dec 4, 2022
  • scRNAseq-Workshop Public
    SmythLab/scRNAseq-Workshop's past year of commit activity
    0 0 0 0 Updated Aug 1, 2021

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