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1. pipeline-umi-amplicon pipeline-umi-amplicon Public

   Forked from lukfor/pipeline-umi-amplicon

   Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers

   Python

2. mutserve mutserve Public

   Forked from seppinho/mutserve

   mtDNA Variant Caller

   Java

3. post_pipeline_analysis post_pipeline_analysis Public

   Little pipeline to do offline analysis of one or each run

   Nextflow

4. analyse_runs_mutserve analyse_runs_mutserve Public

   Collection of scripts to use QC data (post-analysis-pipeline) and the results of the mutserve variant calling of the umi-pipeline-nf results

   R

5. extract-haplotypes-nf extract-haplotypes-nf Public

   nf pipeline to extract haplotypes of run or all runs

6. haplotyping-KIV2-nf haplotyping-KIV2-nf Public

   pipeline to extract haplotypes of one run or all runs

   Python