Home
About
Blog
Products
Forum
Support
Contact
Sunbelt Computer Software
PL/B Language Development and Support
Home
About
Blog
Products
Forum
Support
Contact
rasterframes/python/tests/UDTTests.py at develop · locationtech/rasterframes · GitHub
Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
locationtech
rasterframes
Repository navigation
Code
Issues
130
(130)
Pull requests
13
(13)
Actions
Projects
Wiki
Security and quality
Insights
More
items
Files
Expand file tree
develop
Breadcrumbs
rasterframes
/
python
/
tests
/
UDTTests.py
Copy path
Blame
More file actions
Blame
More file actions
Latest commit
History
History
History
185 lines (135 loc) · 5.27 KB
develop
Breadcrumbs
rasterframes
/
python
/
tests
/
UDTTests.py
Copy path
Top
File metadata and controls
Code
Blame
185 lines (135 loc) · 5.27 KB
Raw
Copy raw file
Download raw file
Open symbols panel
Edit and raw actions
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
import
math
import
numpy
as
np
import
numpy
.
testing
import
pandas
import
pyspark
.
sql
.
functions
as
F
from
pyproj
import
CRS
as
pyCRS
from
pyrasterframes
.
rasterfunctions
import
*
from
pyrasterframes
.
rf_types
import
*
from
pyspark
.
sql
import
DataFrame
,
Row
from
pyspark
.
sql
.
types
import
StructField
,
StructType
def
test_mask_no_data
():
t1
=
Tile
(
np
.
array
([[
1
,
2
], [
3
,
4
]]),
CellType
(
"int8ud3"
))
assert
t1
.
cells
.
mask
[
1
][
0
]
assert
t1
.
cells
[
1
][
1
]
is
not
None
assert
len
(
t1
.
cells
.
compressed
())
==
3
t2
=
Tile
(
np
.
array
([[
1.0
,
2.0
], [
float
(
"nan"
),
4.0
]]),
CellType
.
float32
())
assert
len
(
t2
.
cells
.
compressed
())
==
3
assert
t2
.
cells
.
mask
[
1
][
0
]
assert
t2
.
cells
[
1
][
1
]
is
not
None
def
test_tile_udt_serialization
(
spark
):
udt
=
TileUDT
()
cell_types
=
(
ct
for
ct
in
rf_cell_types
()
if
not
(
ct
.
is_raw
()
or
(
"bool"
in
ct
.
base_cell_type_name
()))
)
for
ct
in
cell_types
:
cells
=
(
100
+
np
.
random
.
randn
(
3
,
3
)
*
100
).
astype
(
ct
.
to_numpy_dtype
())
if
ct
.
is_floating_point
():
nd
=
33.0
else
:
nd
=
33
cells
[
1
][
1
]
=
nd
a_tile
=
Tile
(
cells
,
ct
.
with_no_data_value
(
nd
))
round_trip
=
udt
.
fromInternal
(
udt
.
toInternal
(
a_tile
))
assert
a_tile
==
round_trip
,
"round-trip serialization for "
+
str
(
ct
)
schema
=
StructType
([
StructField
(
"tile"
,
TileUDT
(),
False
)])
df
=
spark
.
createDataFrame
([{
"tile"
:
a_tile
}],
schema
)
long_trip
=
df
.
first
()[
"tile"
]
assert
long_trip
==
a_tile
def
test_masked_deser
(
spark
):
t
=
Tile
(
np
.
array
(
[
[
1
,
2
,
3
,
],
[
4
,
5
,
6
],
[
7
,
8
,
9
],
]
),
CellType
(
"uint8"
),
)
df
=
spark
.
createDataFrame
([
Row
(
t
=
t
)])
roundtrip
=
df
.
select
(
rf_mask_by_value
(
"t"
,
rf_local_greater
(
"t"
,
lit
(
6
)),
1
)).
first
()[
0
]
assert
roundtrip
.
cells
.
mask
.
sum
()
==
3
, (
f"Expected
{
3
}
nodata values but found Tile"
f"
{
roundtrip
}
"
)
def
test_udf_on_tile_type_input
(
spark
,
img_uri
,
rf
):
df
=
spark
.
read
.
raster
(
img_uri
)
# create trivial UDF that does something we already do with raster_Functions
@
F
.
udf
(
"integer"
)
def
my_udf
(
t
):
a
=
t
.
cells
return
a
.
size
# same as rf_dimensions.cols * rf_dimensions.rows
rf_result
=
rf
.
select
(
(
rf_dimensions
(
"tile"
).
cols
.
cast
(
"int"
)
*
rf_dimensions
(
"tile"
).
rows
.
cast
(
"int"
)).
alias
(
"expected"
),
my_udf
(
"tile"
).
alias
(
"result"
),
).
toPandas
()
numpy
.
testing
.
assert_array_equal
(
rf_result
.
expected
.
tolist
(),
rf_result
.
result
.
tolist
())
df_result
=
df
.
select
(
(
rf_dimensions
(
df
.
proj_raster
).
cols
.
cast
(
"int"
)
*
rf_dimensions
(
df
.
proj_raster
).
rows
.
cast
(
"int"
)
-
my_udf
(
rf_tile
(
df
.
proj_raster
))
).
alias
(
"result"
)
).
toPandas
()
numpy
.
testing
.
assert_array_equal
(
np
.
zeros
(
len
(
df_result
)),
df_result
.
result
.
tolist
())
def
test_udf_on_tile_type_output
(
rf
):
# create a trivial UDF that does something we already do with a raster_functions
@
F
.
udf
(
TileUDT
())
def
my_udf
(
t
):
import
numpy
as
np
return
Tile
(
np
.
log1p
(
t
.
cells
))
rf_result
=
rf
.
select
(
rf_tile_max
(
rf_local_subtract
(
my_udf
(
rf
.
tile
),
rf_log1p
(
rf
.
tile
))).
alias
(
"expect_zeros"
)
).
collect
()
# almost equal because of different implemenations under the hoods: C (numpy) versus Java (rf_)
numpy
.
testing
.
assert_almost_equal
(
[
r
[
"expect_zeros"
]
for
r
in
rf_result
], [
0.0
for
_
in
rf_result
],
decimal
=
6
)
def
test_no_data_udf_handling
(
spark
):
t1
=
Tile
(
np
.
array
([[
1
,
2
], [
0
,
4
]]),
CellType
.
uint8
())
assert
t1
.
cell_type
.
to_numpy_dtype
()
==
np
.
dtype
(
"uint8"
)
e1
=
Tile
(
np
.
array
([[
2
,
3
], [
0
,
5
]]),
CellType
.
uint8
())
schema
=
StructType
([
StructField
(
"tile"
,
TileUDT
(),
False
)])
df
=
spark
.
createDataFrame
([{
"tile"
:
t1
}],
schema
)
@
F
.
udf
(
TileUDT
())
def
increment
(
t
):
return
t
+
1
r1
=
df
.
select
(
increment
(
df
.
tile
).
alias
(
"inc"
)).
first
()[
"inc"
]
assert
r1
==
e1
def
test_udf_np_implicit_type_conversion
(
spark
):
a1
=
np
.
array
([[
1
,
2
], [
0
,
4
]])
t1
=
Tile
(
a1
,
CellType
.
uint8
())
exp_array
=
a1
.
astype
(
">f8"
)
@
F
.
udf
(
TileUDT
())
def
times_pi
(
t
):
return
t
*
math
.
pi
@
F
.
udf
(
TileUDT
())
def
divide_pi
(
t
):
return
t
/
math
.
pi
@
F
.
udf
(
TileUDT
())
def
plus_pi
(
t
):
return
t
+
math
.
pi
@
F
.
udf
(
TileUDT
())
def
less_pi
(
t
):
return
t
-
math
.
pi
df
=
spark
.
createDataFrame
(
pandas
.
DataFrame
([{
"tile"
:
t1
}]))
r1
=
df
.
select
(
less_pi
(
divide_pi
(
times_pi
(
plus_pi
(
df
.
tile
))))).
first
()[
0
]
assert
np
.
all
(
r1
.
cells
==
exp_array
)
assert
r1
.
cells
.
dtype
==
exp_array
.
dtype
def
test_crs_udt_serialization
():
udt
=
CrsUDT
()
crs
=
CRS
(
pyCRS
.
from_epsg
(
4326
).
to_proj4
())
roundtrip
=
udt
.
fromInternal
(
udt
.
toInternal
(
crs
))
assert
crs
==
roundtrip
def
test_extract_from_raster
(
spark
,
img_uri
):
# should be able to write a projected raster tile column to path like '/data/foo/file.tif'
rf
=
spark
.
read
.
raster
(
img_uri
)
crs
:
DataFrame
=
rf
.
select
(
rf_crs
(
"proj_raster"
).
alias
(
"crs"
)).
distinct
()
assert
crs
.
schema
.
fields
[
0
].
dataType
==
CrsUDT
()
assert
crs
.
first
()[
"crs"
].
proj4_str
==
"+proj=utm +zone=16 +datum=WGS84 +units=m +no_defs "
You can’t perform that action at this time.