This directory holds test data for samplot. The files have been sampled to contain only reads for the following regions:

4       115922418       115938188       DEL
X       101031678       101090808       DUP

These regions contain the following variants:

4       115928726       115931880       DEL
X       101055330       101067156       DUP

The VCF file NA12878.trio.svt.subset.vcf has the above SVs and can be used for testing samplot_vcf.sh or SV-plaudit's annotate.py.