Package: ExploreModelMatrix

Type: Package

Title: Graphical Exploration of Design Matrices

Version: 1.25.0

Date: 2026-03-16

Authors@R: c(person("Charlotte", "Soneson", role = c("aut", "cre"),

email = "charlottesoneson@gmail.com",

comment = c(ORCID = "0000-0003-3833-2169")),

person("Federico", "Marini", role = "aut",

email = "marinif@uni-mainz.de",

comment = c(ORCID = "0000-0003-3252-7758")),

person("Michael", "Love", role = "aut",

email = "michaelisaiahlove@gmail.com",

comment = c(ORCID = "0000-0001-8401-0545")),

person("Florian", "Geier", role = "aut",

email = "florian.geier@unibas.ch",

comment = c(ORCID = "0000-0002-9076-9264")),

person("Michael", "Stadler", role = "aut",

email = "michael.stadler@fmi.ch",

comment = c(ORCID = "0000-0002-2269-4934")))

Description: Given a sample data table and a design formula,

ExploreModelMatrix generates an interactive application

for exploration of the resulting design matrix.

This can be helpful for interpreting model coefficients and

constructing appropriate contrasts in (generalized) linear

models. Static visualizations can also be generated.

License: MIT + file LICENSE

Encoding: UTF-8

Imports:

shiny (>= 1.5.0),

shinydashboard,

DT,

cowplot,

utils,

dplyr,

magrittr,

tidyr,

ggplot2,

stats,

methods,

rintrojs,

scales,

tibble,

MASS,

limma,

S4Vectors,

shinyjs,

rlang

Suggests:

testthat (>= 2.1.0),

knitr,

rmarkdown,

htmltools,

BiocStyle

VignetteBuilder: knitr

URL: https://github.com/csoneson/ExploreModelMatrix

BugReports: https://github.com/csoneson/ExploreModelMatrix/issues

biocViews: ExperimentalDesign, Regression, DifferentialExpression, ShinyApps

Config/roxygen2/version: 8.1.0