iframe-proxy | Sunbelt Computer Software

81 lines (80 loc) · 2.16 KB

# Generated by roxygen2: do not edit by hand
export(AUC_Scores)
export(CalculateScores)
export(CohenD_IndividualGenes)
export(CorrelationHeatmap)
export(ExpressionHeatmap)
export(FPR_Simulation)
export(IndividualGenes_Violins)
export(PlotScores)
export(ROC_Scores)
export(ROCandAUCplot)
export(VariableAssociation)
export(VisualiseIndividualGenes)
export(calculateDE)
export(geneset_similarity)
export(plotCombinedGSEA)
export(plotGSEAenrichment)
export(plotNESlollipop)
export(plotPCA)
export(plotVolcano)
export(runGSEA)
import(ggplot2)
importFrom(ComplexHeatmap,Heatmap)
importFrom(ComplexHeatmap,HeatmapAnnotation)
importFrom(ComplexHeatmap,draw)
importFrom(RColorBrewer,brewer.pal)
importFrom(circlize,colorRamp2)
importFrom(edgeR,DGEList)
importFrom(effectsize,eta_squared)
importFrom(fgsea,fgsea)
importFrom(fgsea,plotEnrichment)
importFrom(ggh4x,facet_grid2)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_tile)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,margin)
importFrom(ggplot2,scale_fill_gradientn)
importFrom(ggplot2,theme_minimal)
importFrom(ggpubr,annotate_figure)
importFrom(ggpubr,ggarrange)
importFrom(ggpubr,stat_cor)
importFrom(ggrepel,geom_text_repel)
importFrom(grid,gpar)
importFrom(grid,grid.grabExpr)
importFrom(grid,grid.text)
importFrom(grid,textGrob)
importFrom(grid,unit)
importFrom(gridExtra,arrangeGrob)
importFrom(gridExtra,grid.arrange)
importFrom(limma,contrasts.fit)
importFrom(limma,eBayes)
importFrom(limma,lmFit)
importFrom(limma,makeContrasts)
importFrom(limma,topTable)
importFrom(msigdbr,msigdbr)
importFrom(pROC,auc)
importFrom(pROC,roc)
importFrom(reshape2,melt)
importFrom(rstatix,t_test)
importFrom(scales,hue_pal)
importFrom(scales,rescale)
importFrom(scales,squish)
importFrom(stats,TukeyHSD)
importFrom(stats,anova)
importFrom(stats,aov)
importFrom(stats,as.formula)
importFrom(stats,cor)
importFrom(stats,cor.test)
importFrom(stats,lm)
importFrom(stats,prcomp)
importFrom(stats,reshape)
importFrom(stats,t.test)
importFrom(stats,wilcox.test)
importFrom(tibble,tibble)
importFrom(utils,combn)
importFrom(utils,modifyList)

Sunbelt Computer Software

PL/B Language Development and Support

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Uh oh!

Sunbelt Computer Software

PL/B Language Development and Support

Uh oh!

FilesExpand file tree

NAMESPACE

Latest commit

History

NAMESPACE

File metadata and controls